Primer Design Tools
autoprime	http://www.autoprime.de/
bioweb Primer Design	http://bioweb.uwlax.edu/GenWeb/Molecular/Seq_Anal/Primer_Design/primer_design.htm
GeneFisher2	http://bibiserv.techfak.uni-bielefeld.de/genefisher2/submission.html
MethPrimer	http://www.urogene.org/methprimer/
OligoPicker	http://pga.mgh.harvard.edu/oligopicker/index.html
OligoWiz 2 Server	http://www.cbs.dtu.dk/services/OligoWiz/
Online Analysis Tools - PCR	http://molbiol-tools.ca/PCR.htm
PCR Primer Stats	http://www.bioinformatics.org/sms2/pcr_primer_stats.html
PDA	http://dbb.nhri.org.tw/primer/
PerlPrimer	http://perlprimer.sourceforge.net/
Pride	http://pride.molgen.mpg.de/pride.html
Primer Blast NCBI	http://www.ncbi.nlm.nih.gov/tools/primer-blast/
Primer design - Oligo (50mer - 70mer) design software (for DNA chips and sequencing)	http://pride.molgen.mpg.de/
Primer search	http://www.genomatix.de/online_help/help_gems/pod_help.html
Primer3	http://bioinfo.ut.ee/primer3-0.4.0/
Primer3	http://biotools.umassmed.edu/bioapps/primer3_www.cgi
primerbank	http://pga.mgh.harvard.edu/primerbank/
PrimerPremier	http://www.premierbiosoft.com/netprimer/index.html
PrimerStation	http://ps.cb.k.u-tokyo.ac.jp/index.html
PrimerX	http://bioinformatics.org/primerx/
primerz streamlined primer design for promoters	http://grch37.genepipe.ncgm.sinica.edu.tw/primerz/beginDesign.do
primo	http://www.changbioscience.com/primo/primo.html
Probe Design using OligoWiz 2.0	https://services.healthtech.dtu.dk/
ProbeWiz Server	http://www.cbs.dtu.dk/services/DNAarray/probewiz.html
ProMide	http://oligos.molgen.mpg.de/
RepeatMasker	http://www.repeatmasker.org/
UCSC In-Silico PCR	http://genome.ucsc.edu/cgi-bin/hgPcr
Visual Gene Developer	http://www.visualgenedeveloper.net/