| Text Mining Tools | |||
| alias server | list of alias in medline | ||
| Arizona Relation Parser | use of a broad coverage syntax-semantic hybrid grammar | ||
| Arrowsmith | A tool for identifying links between two sets of Medline articles | ||
| askMEDLINE | retrieves articles on a specific question asked | ||
| BioIE | extracts informative sentences from the biomedical literature | ||
| biorat | A search engine and information extraction tool for biological research | ||
| BITOLA | discovers potentially new relations between biomedical concepts | ||
| Chilibot | Retrieve signal transduction literature. | ||
| ConceptLink | explores term relationships between terms in a collection | ||
| Don Swanson's Arrowsmith site | interactive software that extends the power of a MEDLINE search | ||
| EasyPubMed | helps in pubmed search, downloadable | ||
| garban | analysis and rapid functional annotation of microarray data | ||
| GNF SymAtlas | database of genes and expression data | ||
| GoMiner | high throughput gene ontology search | ||
| ihop | create a gene network of co-mentioned genes. | ||
| Litlinker | find possible new connections between medical terms | ||
| MedBlast | searching articles related to a biological sequence | ||
| medlineR | an open source library in R for Medline literature data mining | ||
| medscan | Converting Scientific Text to a Database of Functional Relation | ||
| microgenie | semi-automated querying of PubMed using gene Ids | ||
| mywest | effective mining of web interfaced biomolecular databanks | ||
| PhenogenesViewer | visualizing multidimensional genotypic and phenotypic information together | ||
| PICO | search interface | ||
| prime | database of gene function association extracted from PubMed | ||
| prolink | an integrated protein resource for literature mining | ||
| Pubcrawler | alerting service that searches custom queries in PubMed | ||
| PubGene | users to analyze gene expression data with literature network information | ||
| PubMatrix | allows comparison of any list of terms against any other list of terms | ||
| thea | ontology driven analysis of microarray data | ||
| transminer | Associations among objects such as genes, proteins,and drugs | ||
| Vivisimo | searches and arranges the output into clusters of articles t | ||
| XplorMed | to assist browsing articles by topics using chains of word associations. | ||